How can you put Never Enough in the 2nd group? It's not that metal-ish..., and also How can you put You Not Me in the first group? The others are great, You Not Me is...You Not Me.
Either way, if I had to sort all the songs you mentioned to 3 groups according to my personal opinion...
Incredible: Take Away My Pain, Peruvian Skies, New Milenium, Never Enough, (Panic Attack)
Decent: (Panic Attack), Dark Eternal Night, (You or Me)
Bad: A Rite of Passage, You Not Me
PA is somewhere in the middle of the first 2 groups, also I had to mention the demo of You Not Me because it's in a higher position than the song itself.
Edit: I guess I'm kinda weird though, FII Demos beat SC any day imo, and I still don't know which album is better, FII Demos or BCSL.