I'm not a fan of Stay With Me too. On the third listen I would say it's another great album (they have never done a bad album, even Identity Crisis is great for me). My favourites are half of the songs of the album at this point (Hurricane, The Window, The Long Defeat with Seneca, Whistleblower and Salt and Shadow). I really like every song, only Wake Up and Stay With Me are only good and not great.
But honestly, I still like old Thrice a bit more, I don't know if some songs of this album will enter my Thrice top 10, but the whole album is really consistent!