I'd probably go with bootleg versions of most of the songs, just to create something different. So instead of listing specific live albums or even specific bootlegs, I'll just list tours they were featured on.
Metropolis '96 - Fix for 96 show (I'm starting with Metropolis because that was the song originally intended to open the album)
Another Day - Train of Thought tour (has extended keyboard solo at the end)
Take the Time - World Tourbulence (has the By-Tor/Working Man jam tacked on to the end)
Surrounded '07 - Chaos in Motion tour
Pull Me Under (warped version) - a show that has this version of the song
Under a Glass Moon - Music in Progress tour (song hasn't changed much live at all)
Wait for Sleep (full band version) - Images and Tour (included JP, JM and MP in the song, plus has a 1 to 1.5 minute piano intro)
Learning to Live '05 - 20th Anniversary tour (has different instrumental section, including teasers of Crossroads and La Villa Strangiato that they solo over)